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openaq-quality-checker

OpenAQ Quality Checks

OpenAQ Quality Checks is a command line interface for flagging potentially invalid air quality measurements.

Have an OpenAQ data quality concern or experience you would like to share? Please add it to the OpenAQ Community: What is your OpenAQ data quality experience? issue!

Use

Prerequisits

• node, npm, nvm
• jq is recommended if using json.

Setup

nvm use
yarn install
yarn test

Example Usage

openaq-quality-checks expects a list of items, either in json or csv.

A set of default flags are configured in config.yml. The default flags are:

• E flags the value -999
• N flags negative values
• R flags repeating values, grouped by coordinates and ordered by date.

This configuration can be overriden using the --config <file.yml> argument, which should point to a yml file which has the following structure:

keyOne: # Arbitrary identifier for the flag, e.g. 'errors'. Useful for merging with the default configuration. 
  flag: Any string, e.g. E
  type: One of exact|set|range|repeats
  # Depending on the type, other values may be included. See lib/flagger.js for what can be configured. 
keyTwo:
  # ... 

This configuration is merged with the default configuration, overriding fields that exist and adding fields that do not exist.

Read and output JSON

Note: Commands below require jq, but jq is just for pretty printing json. If you don't have jq installed, remove the trailing | jq .

cat examples/addis-ababa-20180202.json | quality-check | jq .
# or 
quality-check --infile examples/addis-ababa-20180202.json | jq .

Read and output CSV

cat examples/addis-ababa-20180202.csv | quality-check --input-format csv --output-format csv
# or 
quality-check --infile examples/addis-ababa-20180202.csv --input-format csv --output-format csv

Override the default configuration

quality-check --infile examples/addis-ababa-20180202.json --config tests/test-config.yml | jq .

Skip the 'N' and 'R' flags

quality-check --infile examples/addis-ababa-20180202.json --skip N R | jq .

Remove all errors

quality-check --infile examples/addis-ababa-20180202.json --remove E | jq .

Remove all flagged items

quality-check --infile examples/addis-ababa-20180202.json --remove-all | jq .

Using the API call

curl 'https://api.openaq.org/v1/measurements?location=US%20Diplomatic%20Post:%20Addis%20Ababa%20School&date_from=2018-02-02&date_to=2018-02-06&limit=10' | jq '.results' | quality-check | jq .