Search results

samflags

Decode SAM flags into English using the command-line

• samtools
• sam
• bam
• parser
• sam flags
• bioinformatics
• samtools view

cbp44

published 1.0.0 • 7 years agopublished 1.0.0 7 years ago

samfilter

These two tools allow the counting of alignment flags (https://broadinstitute.github.io/picard/explain-flags.html) in a SAM formated file and the extraction of reads for selected flags.

• SAM
• filter
• alignment
• flag
• fastq
• extract
• reads

jallmer

published 0.2.0 • 3 years agopublished 0.2.0 3 years ago